All functions

armRatioCI() swapChrRegionDfSizeAndMarks()

FUNCTIONS armRatioCI and swapChrRegionDfSizeAndMarks.

asymmetry() asymmetryA2()

FUNCTIONS asymmetry and asymmetryA2.

dfChrSizeHolo bigdfChrSizeHolo parentalAndHybHoloChrSize bigdfOfChrSize3Mb

Chr. basic data Holo.

dfOfChrSize bigdfOfChrSize humChr allChrSizeSample parentalAndHybChrSize traspadf

Chr. basic data Monocen.

citrusSize() citrusMarkPos() markOverCMA()

FUNCTIONS: citrusSize, citrusMarkPos, markOverCMA

dfMarkColor humMarkColor mydfMaColor dfMarkColor5S25S dfMarkColorIn

Mark characteristics

genBankReadIF()

FUNCTION genBankReadIF

make.uniqueIF()

FUNCTION make.uniqueIF

makedfMarkColorMycolors()

FUNCTION to make a data.frame of Marks' characterisitcs

mapGGChr() mapGGChrMark()

FUNCTIONS mapGGChr and mapGGChrMark (for ggplot)

bigdfMarkPosHolo dfMarkPosHolo dfAlloParentMarksHolo bigdfOfMarks3Mb bigdfMarkPosHolo2

Mark Positional data - Holocen.

bigdfOfMarks dfOfMarks dfOfMarks2 humMarkPos allMarksSample dfAlloParentMarks traspaMarks

Mark Positional data - monocentrics

namesToColumns()

FUNCTION that modifies marks' names into columns

perMark()

FUNCTION perMark

plotIdiograms()

Plot idiograms of karyotypes/genomes with and without centromere

posCalc() fillMarkInfo2() fillMarkInfo()

FUNCTION posCalc and fillMarkInfo

robert()

FUNCTION to produce a Robertsonian translocation

runBoard()

FUNCTION runBoard